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JBrowse 2 Plugin Store

MsaView

Colin Diesh

Apache License 2.0

https://github.com/GMOD/jbrowse-plugin-msaview

Description:

multiple sequence alignment browser plugin for JBrowse 2

GDC

Garrett Stevens, Colin Diesh, Rob Buels

MIT

https://github.com/GMOD/jbrowse-plugin-gdc

Description:

JBrowse 2 plugin for integrating with GDC resources

Quantseq

Elliot Hershberg

Apache License 2.0

https://github.com/GMOD/jbrowse-plugin-quantseq

Description:

External JB2 plugin implementing a QuantitativeSequence track for displaying base-resolution models.

GWAS

Colin Diesh

MIT

https://github.com/cmdcolin/jbrowse-plugin-gwas

Description:

Plugin for displaying GWAS results such as manhattan plot renderings

UCSC

Colin Diesh

MIT

https://github.com/cmdcolin/jbrowse-plugin-ucsc-api

Description:

A JBrowse 2 plugin for accessing the UCSC API

Biothings

Colin Diesh

MIT

https://github.com/cmdcolin/jbrowse-plugin-biothings-api

Description:

Adapts to APIs like mygene.info to get super rich gene annotations

Ideogram

Colin Diesh

Apache License 2.0

https://github.com/cmdcolin/jbrowse-plugin-ideogram

Description:

JBrowse 2 plugin for rendering ideograms

CIVIC

Colin Diesh

Apache License 2.0

https://github.com/cmdcolin/jbrowse-plugin-civic-api

Description:

JBrowse 2 plugin for fetching data from the CIVIC clinical interpretation of cancer variants