PileupConnectors

Auto-generated from the config schema in the source. See the config guide for concepts. Provided by the alignments plugin. View source.

The pileup's connectors layer: lines over the pileup rows joining each read to its mate or split segment, colored by insert size and orientation, as the reads' color of that name paints them. The band of arcs or the read cloud is readConnections.

Example usage#

{ type: 'LinearAlignmentsDisplay', pileup: { connectors: { show: true } } }

Config slots#

A setting written to it names members one by one: a member left out stays as it is, and null resets one. Slot types (fileLocation, frozen, ...) are explained in the config slot types reference. Slots a base configuration contributes are listed here too, so this table is the whole surface.