MashMapAdapter
Note: this document is automatically generated from configuration objects in our source code. See Config guide for more info
Source file
plugins/comparative-adapters/src/MashMapAdapter/configSchema.ts
MashMapAdapter - Slots
slot: assemblyNames
assemblyNames: {
type: 'stringArray',
defaultValue: [],
description:
'Target is the first value in the array, query is the second',
}
slot: targetAssembly
targetAssembly: {
type: 'string',
defaultValue: '',
description: 'Alternative to assemblyNames array: the target assembly',
}
slot: queryAssembly
queryAssembly: {
type: 'string',
defaultValue: '',
description: 'Alternative to assemblyNames array: the query assembly',
}
slot: outLocation
outLocation: {
type: 'fileLocation',
defaultValue: {
uri: '/path/to/mashmap.out',
locationType: 'UriLocation',
},
}