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HicRenderer

Note: this document is automatically generated from configuration objects in our source code. See Config guide for more info

Source file

plugins/hic/src/HicRenderer/configSchema.ts

HicRenderer - Slots

slot: baseColor

baseColor: {
type: 'color',
description: 'base color to be used in the hic alignment',
defaultValue: '#f00',
}

slot: color

color: {
type: 'color',
description: 'the color of each feature in a hic alignment',
defaultValue: `jexl:colorString(hsl(alpha(baseColor,min(1,count/(maxScore/20)))))`,
contextVariable: ['count', 'maxScore', 'baseColor'],
}

slot: maxHeight

maxHeight: {
type: 'integer',
description: 'the maximum height to be used in a hic rendering',
defaultValue: 600,
}