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BigBedAdapter

Note: this document is automatically generated from configuration objects in our source code. See Config guide for more info

Source file

plugins/bed/src/BigBedAdapter/configSchema.ts

BigBedAdapter - Slots

slot: bigBedLocation

bigBedLocation: {
type: 'fileLocation',
defaultValue: { uri: '/path/to/my.bb', locationType: 'UriLocation' },
}

slot: scoreColumn

scoreColumn: {
type: 'string',
description: 'The column to use as a "score" attribute',
defaultValue: '',
}

slot: aggregateField

aggregateField: {
type: 'string',
description: 'An attribute to aggregate features with',
defaultValue: 'geneName',
}