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MCScanSimpleAnchorsAdapter

Note: this document is automatically generated from configuration objects in our source code. See Config guide for more info

Source file​

plugins/comparative-adapters/src/MCScanSimpleAnchorsAdapter/configSchema.ts

MCScanSimpleAnchorsAdapter - Slots​

slot: mcscanSimpleAnchorsLocation​

mcscanSimpleAnchorsLocation: {
      type: 'fileLocation',
      defaultValue: {
        uri: '/path/to/mcscan.anchors.simple',
        locationType: 'UriLocation',
      },
    }

slot: bed1Location​

bed1Location: {
      type: 'fileLocation',
      defaultValue: {
        uri: '/path/to/file.bed',
        locationType: 'UriLocation',
      },
    }

slot: bed2Location​

bed2Location: {
      type: 'fileLocation',
      defaultValue: {
        uri: '/path/to/file.bed',
        locationType: 'UriLocation',
      },
    }

slot: assemblyNames​

assemblyNames: {
      type: 'stringArray',
      defaultValue: [],
    }