Skip to main content

LinearAlignmentsDisplay

Note: this document is automatically generated from configuration objects in our source code. See Config guide for more info

Source file​

plugins/alignments/src/LinearAlignmentsDisplay/models/configSchema.ts

has a "pileup" sub-display, where you can see individual reads and a quantitative "snpcoverage" sub-display track showing SNP frequencies

LinearAlignmentsDisplay - Slots​

slot: pileupDisplay​

pileupDisplay: pm.getDisplayType('LinearPileupDisplay').configSchema

slot: snpCoverageDisplay​

snpCoverageDisplay: pm.getDisplayType('LinearSNPCoverageDisplay').configSchema

slot: height​

height: {
        type: 'number',
        defaultValue: 250,
      }

LinearAlignmentsDisplay - Derives from​

baseConfiguration: baseLinearDisplayConfigSchema