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JBrowseReactLinearGenomeViewSessionModel

Auto-generated from the @jbrowse/mobx-state-tree model in the source — see the developer guide for concepts. View source.

The shared EmbeddedSessionMixin plus this product's tracks mixin, its single LinearGenomeView, and disableAddTracks, which is a root prop rather than a session one. The mixin and the view are spelled out here rather than passed to a shared factory because types.compose cannot infer through a generic — see EmbeddedSessionMixin.

Each section ends with the members a composed model contributes, linked to the page that documents them.

Properties

MemberDescription
view
view: pluginManager.getViewType('LinearGenomeView').stateModel
16 inherited properties from 4 models

From SessionTracksManagerSessionMixin: sessionTracks, trackConfigDeltas

From BaseSessionModel: id, name, focusedViewId, highlights, highlightsVisible, highlightLabelsVisible, heldForMissingPlugins

From ConnectionManagementSessionMixin: connectionInstances, connectionTrackConfigs

From DrawerWidgetSessionMixin: drawerPosition, drawerWidth, widgets, activeWidgets, minimized

Volatiles

10 inherited volatiles from 5 models

From SessionTracksManagerSessionMixin: editableTrackConfigs

From BaseSessionModel: selection, hovered, queueOfDialogs, preferencesOverrides

From SnackbarModel: snackbarMessages, errorDialog

From EmbeddedSessionThemeMixin: sessionThemeMode

From DrawerWidgetSessionMixin: poppedOut, modalWidgets

Getters

MemberDescription
disableAddTracks
boolean
views
(ModelInstanceTypeProps<…> & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & { rubberbandClickMenuItems(clickOffset: BpOffset): MenuItem[]; highlightMenuItems(_highlight: HighlightType): MenuItem[]; } & { flyTo: (centerBp: number, windowWidthBp: number) => void; flyToCenter(coord: number, refName: string, displayedRegionIndex?: number | undefined): void; flyToFit(centerBp: number, fitWidthBp: number): void; } & { afterCreate(): void; afterAttach(): void; } & IStateTreeNode<…>)[]
stickyViewHeaders
boolean		Pin the header, and scroll the tracks under it, whenever the view is bounded -- which is the only time it means anything, since an unbounded view scrolls with the host's page and has nothing to pin against. The LGV model reads this off the session (stickyViewHeaders === true) and so does the embedded view title above it, the same two readers the web app has.
28 inherited getters from 7 models

From SessionTracksManagerSessionMixin: trackBasesById, tracks, promotableTrackIds

From BaseSessionModel: root, jbrowse, rpcManager, configuration, adminMode, textSearchManager, assemblies, DialogComponent, DialogProps, animationMode, scrollZoom, numberGrouping

From SnackbarModel: snackbarMessageSet

From EmbeddedSessionMixin: viewTitleBars, version, assemblyNames, assemblyManager

From EmbeddedSessionThemeMixin: themeOptions, palette, styleTheme, theme

From ConnectionManagementSessionMixin: connections

From DrawerWidgetSessionMixin: visibleWidget, drawerVisible, modalWidgetVisible

Methods

15 inherited methods from 6 models

From SessionTracksManagerSessionMixin: withTrackEdits, baseTrackConfig, getEditableTrackConfig, getTrackConfigChanges, isTrackOverride

From TracksManagerSessionMixin: getTrackById, getTracksById

From ReferenceManagementSessionMixin: getReferringMultiple, getReferring

From BaseSessionModel: getPreferenceDefault, getPreference, getPreferenceChanges

From EmbeddedSessionThemeMixin: getActiveThemeOptions

From TrackMenuSessionMixin: getTrackListMenuItems, getTrackActionMenuItems

Actions

MemberDescription
addView
<N extends string>(typeName: N, initialState?: NoInfer<…> | undefined) => ModelInstanceTypeProps<…> & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & { flyTo: (centerBp: number, windowWidthBp: number) => void; flyToCenter(coord: number, refName: string, displayedRegionIndex?: number | undefined): void; flyToFit(centerBp: number, fitWidthBp: number): void; } & { afterCreate(): void; afterAttach(): void; } & IStateTreeNode<…>
removeView
() => void
launchView
(typeName: string, initialState?: any) => Promise<…>		same as addView — the single view type here is always eagerly registered, so there is nothing to load; async to satisfy the AbstractViewContainer contract
59 inherited actions from 7 models

From SessionTracksManagerSessionMixin: addSessionTrackConf, publishTrackConf, addTrackConf, updateTrackConfiguration, promoteTrackConfigDeltas, resetTrackConfiguration, deleteTrackConf

From ReferenceManagementSessionMixin: dereferenceTrack

From BaseSessionModel: setSelection, clearSelection, setHovered, setHighlightsVisible, setHighlightLabelsVisible, addHighlight, removeHighlight, updateHighlight, setHighlights, setPreferenceOverride, clearPreferenceOverrides, clearPreferenceOverride, setScrollZoom, setName, setFocusedViewId, removeActiveDialog, queueDialog, removeDialog

From SnackbarModel: notify, notifyError, setErrorDialog, pushSnackbarMessage, popSnackbarMessage, removeSnackbarMessage

From EmbeddedSessionThemeMixin: setThemeMode

From ConnectionManagementSessionMixin: makeConnection, breakConnection, teardownConnection, deleteConnection, addConnectionConf, clearConnections, captureConnectionTrack, updateConnectionTrackConfig, setConnectionTrackConfig, pruneConnectionTrackConfig, hydrateConnection

From DrawerWidgetSessionMixin: setDrawerPosition, updateDrawerWidth, resizeDrawer, addWidget, showWidget, hideWidget, minimizeWidgetDrawer, showWidgetDrawer, popoutWidget, returnWidgetToDrawer, setModalWidgets, hideAllWidgets, closeModalWidget, openWidget, editConfiguration