ReadTooltip

Auto-generated from the config schema in the source — see the config guide for concepts. Provided by the alignments plugin. View source.

The alignments displays' tooltip: the field the read hover's first line reads, spelt as encoding.color and facet spell one — a field, a path (mate.name), a tag (tags.HP) or a jexl: expression over feature. A bare string is the field. Unset, the first line is the read's name; a read the field reads nothing on, or throws on, keeps its name too. Whenever the first line is not the read's name, the hover adds a Name: line. The other hovers (a mismatch inside a read, coverage, arcs, junctions) are unaffected. The worker reads the field once per drawn read on each fetch, so a jexl: expression on a deep BAM costs a little on every fetch.

Example usage#

{ type: 'LinearAlignmentsDisplay', tooltip: 'tags.HP' }

{
  type: 'LGVSyntenyDisplay',
  tooltip: "jexl:get(feature,'mate').name",
}

Config slots#

A setting written to it names members one by one: a member left out stays as it is, and null resets one. Slot types (fileLocation, frozen, ...) are explained in the config slot types reference. Slots a base configuration contributes are listed here too, so this table is the whole surface.