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SyntenyRender

Auto-generated from the config schema in the source. See the config guide for concepts. Built into JBrowse core. View source.

How the linear synteny and circular views rasterize their ribbons, apart from what the data says: antialias gives a ribbon thinner than a pixel the share of the pixel it covers, so an unfiltered whole-genome view reads as the density it has rather than a solid block.

Example usage

{ type: 'LinearSyntenyView', render: { antialias: false } }

Config slots

Slot types (fileLocation, frozen, ...) are explained in the config slot types reference. Slots a base configuration contributes are listed here too, so this table is the whole surface.

Slot Description
antialias
maybeBoolean		 fade a sub-pixel ribbon by the share of the pixel it covers, down to 0.15 of its alpha; ribbon edges stay antialiased either way. Unset fades once sub-pixel ribbons dominate a display