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SyntenyRender

Auto-generated from the config schema in the source — see the config guide for concepts. Built into JBrowse core. View source.

How the linear synteny and circular views rasterize their ribbons, apart from what the data says: antialias gives a ribbon thinner than a pixel the share of the pixel it covers, so an unfiltered whole-genome view reads as the density it has rather than a solid block.

Example usage

{ type: 'LinearSyntenyView', render: { antialias: false } }

Config slots

Slot types (fileLocation, frozen, ...) are explained in the config slot types reference. Slots a base configuration contributes are listed here too, so this table is the whole surface.

SlotDescription
antialias
maybeBoolean		fade a sub-pixel ribbon by the share of the pixel it covers, down to 0.15 of its alpha; ribbon edges stay antialiased either way. Unset fades once sub-pixel ribbons dominate a display