LGVSyntenyCoverage
Auto-generated from the config schema in the source — see the config guide for concepts. Provided by the linear-comparative-view plugin. View source.
The LGVSyntenyDisplay's coverage setting: the
CoverageBand object with show defaulting to off.
Example usage
{ type: 'LGVSyntenyDisplay', coverage: { show: true } }Related links
- Base config: CoverageBand
Config slots
A setting written to it names members one by one: a member left out stays as it is, and null resets one. Slot types (fileLocation, frozen, ...) are explained in the config slot types reference. Slots a base configuration contributes are listed here too, so this table is the whole surface.
| Slot | Description |
|---|---|
showboolean = false | draw the coverage band |
| Inherited from CoverageBand | 4 slots |
heightnumber = 45 | height of the coverage band in pixels |
| encoding CoverageEncoding | The depth axis, encoding.y: its scale, axis and rules. |
| interbase CoverageInterbase | The insertion and clip marks between bases: show, and the filter deciding which positions get an indicator triangle. |
| alleles CoverageAlleles | The colored allele segments: show, and the filter on each one's fraction. |