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MafSequenceWidget

Auto-generated @jbrowse/mobx-state-tree API for the current JBrowse release — see pluggable elements for concepts. Provided by the maf plugin. View source.

Widget showing multiple-alignment (MAF) sequence for a set of samples over the connected view's regions, with per-row hover highlight state.

Properties

MemberDescription
id
id: types.identifier
type
type: types.literal('MafSequenceWidget')
adapterConfig
adapterConfig: types.frozen<AnyConfigurationModel | undefined>(undefined)
samples
samples: types.frozen<Sample[] | undefined>(undefined)
regions
regions: types.frozen<
        | {
            refName: string
            start: number
            end: number
            assemblyName: string
          }[]
        | undefined
      >(undefined)
connectedViewId
connectedViewId: types.maybe(types.string)

Volatiles

MemberDescription
hoverHighlight
hoverHighlight: undefined as HoverHighlight | undefined

Actions

MemberDescription
setHoverHighlight
(highlight: HoverHighlight | undefined) => void