Skip to main content

v2.11.0 Release

ยท 3 min read

This release adds a new option "Color by CDS" to color the reference sequence track and CDS features in gene tracks by their reading frame

Screenshot showing the "Color by CDS" setting on the linear genome view menu

This release also adds new Hi-C coloring options, including a log-scale mode that enhances visible patterns

There are also many other small fixes including the ability to highlight multiple regions from the URL bar &highlight= option, faster zooming with the zoom in/out buttons, and more

See release notes for details


To install JBrowse 2 for the web, you can download the link above, or you can use the JBrowse CLI to automatically download the latest version. See the JBrowse web quick start for more details.

yarn run v1.22.19 $ lerna-changelog --silent --silent --next-version 2.11.0

2.11.0 (2024-04-16)โ€‹

๐Ÿš€ Enhancementโ€‹

๐Ÿ› Bug Fixโ€‹

  • Other
    • #4318 Use node-fetch-native to fix warning from JBrowse CLI on node 21+ (@cmdcolin)
    • #4319 Fix Hi-C rendering for some high resolution files (@cmdcolin)
    • #4314 Fix loading of BED12 data from a plaintext BED with column headers (@cmdcolin)
    • #4293 Fix alignment curves showing up in inkscape for breakpoint svg (@cmdcolin)
    • #4287 Fix snap package and also add deb package (@cmdcolin)
    • #4277 Fix usage of --assemblyNames in jbrowse add-connection (@cmdcolin)
    • #4275 Fixes bug on URL highlight param in which refName aliases were not working (@carolinebridge-oicr)
  • text-indexing

Committers: 3โ€‹