JBrowse 1

JBrowse 1.14.2 maintenance release

June 4, 2018

JBrowse 1.14.2 has been released!

Files for download

Minor improvements

  • Added a datasetSelectorWidth configuration key that sets the width of the dataset selector. The width defaults to 15em. Example setting in tracks.conf: [GENERAL] classicMenu = true datasetSelectorWidth = 20em Thanks to @srobb1 for pointing out the need for this. (issue #1059, @rbuels)

  • When exporting GFF3 from the 'Save track data' menu, the ##sequence-region pragma now specifies the exact sequence region that was exported from the UI. Thanks to @mwdavis2 for pointing this out! (issue #905, @rbuels)

  • Improved the welcome screen for the desktop version of JBrowse (issue #1045, issue #1050, @cmdcolin)

Bug fixes

  • Fixed the --config option for add-bw-track.pl. Although documented in the script's POD, it was not actually being processed. Thanks to @loraine-gueguen for noticing it, and for contributing the fix! (issue #1063, issue #1064, @loraine-gueguen)

  • Fixed a bug in which setup.sh failed if run twice in a row under some circumstances. (issue #1053, @cmdcolin)

  • Fixed a bug in which setup.sh did not accept nodejs version 10 as sufficiently recent. (issue #1048, @cmdcolin)

  • Fixed a bug in which the "Loading..." message erroneously appeared at the top of the dataset-selection page. Many thanks to @srobb1 for noticing this and reporting it! (issue #1057, @rbuels)

  • JSON syntax errors in the new configuration loading code now have better error messages. Thanks to @billzt for pointing out the need for this! (issue #1061, @rbuels)

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