JBrowse 1.3.1 has been released, this is a minor release with fixes for some bugs found in 1.3.0.
- [JBrowse-1.3.1-min.zip](/wordpress/wp-content/plugins/download-monitor/download.php?id=7 "download JBrowse 1.3.1 - min") - 2.0MB
- Includes all that is needed for running JBrowse and formatting your own data.
- [JBrowse-1.3.1-full.zip](/wordpress/wp-content/plugins/download-monitor/download.php?id=8 "download JBrowse 1.3.1 - full") - 4.7MB
- Includes developer API documentation, developer test suites, additional sample data
Changes in this release
Fixed memory-management bug that caused way too much RAM to be used by FeatureTrack loading (flatfile, bam, and biodb-to-json.pl) when loading with very large numbers of reference sequences. Big thanks to Tristan Lubinski for help in isolating this.
Fixed some bugs in BAM support section of setup.sh autosetup script, thanks to Tristan Lubinski for help in isolating this as well.
Added an example document with an iframe running JBrowse in embedded mode in docs/examples/embedded_mode.html
flatfile-to-json.pl now loads the 'score' attribute of features in the JSON.