SharedLinearPileupDisplayMixin
Note: this document is automatically generated from mobx-state-tree objects in our source code. See Core concepts and intro to pluggable elements for more info
Also note: this document represents the state model API for the current released version of jbrowse. If you are not using the current version, please cross reference the markdown files in our repo of the checked out git tag
Links
Docs
extends
SharedLinearPileupDisplayMixin - Properties
property: configuration
// type signature
AnyConfigurationSchemaType
// code
configuration: ConfigurationReference(configSchema)
property: featureHeight
// type signature
IMaybe<ISimpleType<number>>
// code
featureHeight: types.maybe(types.number)
property: noSpacing
// type signature
IMaybe<ISimpleType<boolean>>
// code
noSpacing: types.maybe(types.boolean)
property: fadeLikelihood
// type signature
IMaybe<ISimpleType<boolean>>
// code
fadeLikelihood: types.maybe(types.boolean)
property: trackMaxHeight
// type signature
IMaybe<ISimpleType<number>>
// code
trackMaxHeight: types.maybe(types.number)
property: colorBySetting
// type signature
IType<ColorBy, ColorBy, ColorBy>
// code
colorBySetting: types.frozen<ColorBy | undefined>()
property: filterBySetting
// type signature
IType<FilterBy, FilterBy, FilterBy>
// code
filterBySetting: types.frozen<FilterBy | undefined>()
property: jexlFilters
// type signature
IOptionalIType<IArrayType<ISimpleType<string>>, [undefined]>
// code
jexlFilters: types.optional(types.array(types.string), [])
SharedLinearPileupDisplayMixin - Getters
getter: colorBy
// type
any
getter: filterBy
// type
any
getter: rendererConfig
// type
{ [x: string]: any; } & NonEmptyObject & { setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({ [x: string]: any; } & NonEmptyObject & ... & IStateTreeNode<...>); } & IStateTreeNode<...>
getter: maxHeight
// type
any
getter: featureHeightSetting
// type
any
getter: featureUnderMouse
// type
Feature
getter: renderReady
// type
;() => boolean
getter: filters
// type
SerializableFilterChain
getter: rendererTypeName
// type
string
getter: DisplayBlurb
// type
({ model, }: { model: { sortedBy?: SortedBy; }; }) => Element
SharedLinearPileupDisplayMixin - Methods
method: contextMenuItems
// type signature
contextMenuItems: () => { label: string; icon: (props: SvgIconProps) => Element; onClick: () => void; }[]
method: renderPropsPre
// type signature
renderPropsPre: () => any
method: colorSchemeSubMenuItems
// type signature
colorSchemeSubMenuItems: () => { label: string; onClick: () => void; }[]
method: trackMenuItems
// type signature
trackMenuItems: () => MenuItem[]
SharedLinearPileupDisplayMixin - Actions
action: setTagsReady
// type signature
setTagsReady: (flag: boolean) => void
action: setMaxHeight
// type signature
setMaxHeight: (n?: number) => void
action: setFeatureHeight
// type signature
setFeatureHeight: (n?: number) => void
action: setNoSpacing
// type signature
setNoSpacing: (flag?: boolean) => void
action: setColorScheme
// type signature
setColorScheme: (colorScheme: ColorBy) => void
action: updateColorTagMap
// type signature
updateColorTagMap: (uniqueTag: string[]) => void
action: setFeatureUnderMouse
// type signature
setFeatureUnderMouse: (feat?: Feature) => void
action: selectFeature
// type signature
selectFeature: (feature: Feature) => void
action: copyFeatureToClipboard
uses copy-to-clipboard and generates notification
// type signature
copyFeatureToClipboard: (feature: Feature) => void
action: setConfig
// type signature
setConfig: (conf: { [x: string]: any; } & NonEmptyObject & { setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({ [x: string]: any; } & NonEmptyObject & ... & IStateTreeNode<...>); } & IStateTreeNode<...>) => void
action: setFilterBy
// type signature
setFilterBy: (filter: FilterBy) => void
action: setJexlFilters
// type signature
setJexlFilters: (filters: string[]) => void