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LinearAlignmentsDisplay

Note: this document is automatically generated from mobx-state-tree objects in our source code. See Core concepts and intro to pluggable elements for more info

Also note: this document represents the state model API for the current released version of jbrowse. If you are not using the current version, please cross reference the markdown files in our repo of the checked out git tag

Source code

GitHub page

Docs​

extends

LinearAlignmentsDisplay - Getters​

getter: height​

// type
any

getter: featureIdUnderMouse​

// type
any

getter: pileupConf​

// type
any

getter: features​

// type
any

getter: DisplayBlurb​

// type
any

getter: sortedBy​

// type
any

getter: coverageConf​

// type
any

LinearAlignmentsDisplay - Methods​

method: getFeatureByID​

// type signature
getFeatureByID: (blockKey: string, id: string) => any

method: searchFeatureByID​

// type signature
searchFeatureByID: (id: string) => any

method: trackMenuItems​

// type signature
trackMenuItems: () => MenuItem[]

LinearAlignmentsDisplay - Actions​

action: setScrollTop​

// type signature
setScrollTop: (scrollTop: number) => void

action: setSNPCoverageHeight​

// type signature
setSNPCoverageHeight: (n: number) => void

action: setSNPCoverageDisplay​

// type signature
setSNPCoverageDisplay: (configuration: { [x: string]: any; } & NonEmptyObject & { setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({ [x: string]: any; } & NonEmptyObject & ... & IStateTreeNode<...>); } & IStateTreeNode<...>) => void

action: setFeatureDensityStatsLimit​

// type signature
setFeatureDensityStatsLimit: (stats?: FeatureDensityStats) => void

action: setPileupDisplay​

// type signature
setPileupDisplay: (configuration: { [x: string]: any; } & NonEmptyObject & { setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({ [x: string]: any; } & NonEmptyObject & ... & IStateTreeNode<...>); } & IStateTreeNode<...>) => void

action: setHeight​

// type signature
setHeight: (n: number) => number

action: setFilterBy​

// type signature
setFilterBy: (filter: FilterBy) => void

action: setLowerPanelType​

// type signature
setLowerPanelType: (type: string) => void

action: resizeHeight​

// type signature
resizeHeight: (distance: number) => number

action: renderSvg​

// type signature
renderSvg: (opts: { rasterizeLayers?: boolean; }) => Promise<Element>