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JBrowseReactLinearGenomeViewRootModel

Note: this document is automatically generated from mobx-state-tree objects in our source code. See Core concepts and intro to pluggable elements for more info

Also note: this document represents the state model API for the current released version of jbrowse. If you are not using the current version, please cross reference the markdown files in our repo of the checked out git tag

Source code

GitHub page

Docs​

JBrowseReactLinearGenomeViewRootModel - Properties​

property: config​

// type signature
IModelType<{ configuration: ConfigurationSchemaType<{ rpc: ConfigurationSchemaType<{ defaultDriver: { type: string; description: string; defaultValue: string; }; drivers: IOptionalIType<IMapType<ITypeUnion<ModelCreationType<ExtractCFromProps<Record<string, any>>>, ModelSnapshotType<...>, {} & ... 1 more ... & NonEmp...
// code
config: createConfigModel(pluginManager, assemblyConfig)

property: session​

// type signature
IModelType<{ id: IOptionalIType<ISimpleType<string>, [undefined]>; name: ISimpleType<string>; margin: IType<number, number, number>; } & { ...; } & { ...; } & { ...; } & { ...; }, { ...; } & ... 22 more ... & { ...; }, _NotCustomized, _NotCustomized>
// code
session: Session

property: assemblyManager​

// type signature
IOptionalIType<IModelType<{ assemblies: IArrayType<IModelType<{ configuration: IMaybe<IReferenceType<IAnyType>>; }, { error: unknown; loadingP: Promise<void>; volatileRegions: BasicRegion[]; refNameAliases: RefNameAliases; lowerCaseRefNameAliases: RefNameAliases; cytobands: Feature[]; } & ... 5 more ... & { ...; }, ...
// code
assemblyManager: types.optional(AssemblyManager, {})

property: disableAddTracks​

// type signature
IOptionalIType<ISimpleType<boolean>, [undefined]>
// code
disableAddTracks: types.optional(types.boolean, false)

property: internetAccounts​

// type signature
IArrayType<IAnyType>
// code
internetAccounts: types.array(
        pluginManager.pluggableMstType('internet account', 'stateModel'),
      )

JBrowseReactLinearGenomeViewRootModel - Getters​

getter: jbrowse​

// type
{ configuration: { [x: string]: any; } & NonEmptyObject & { setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({ ...; } & NonEmptyObject & { ...; } & IStateTreeNode<...>); } & IStateTreeNode<...>; ... 5 more ...; plugins: any; } & NonEmptyObject & { ...; } & IStateTreeNode<...>

JBrowseReactLinearGenomeViewRootModel - Actions​

action: setSession​

// type signature
setSession: (sessionSnapshot: ModelCreationType<ExtractCFromProps<{ id: IOptionalIType<ISimpleType<string>, [undefined]>; name: ISimpleType<string>; margin: IType<number, number, number>; } & { ...; } & { ...; } & { ...; } & { ...; }>>) => void

action: renameCurrentSession​

// type signature
renameCurrentSession: (sessionName: string) => void

action: setError​

// type signature
setError: (error: unknown) => void

action: addInternetAccount​

// type signature
addInternetAccount: (acct: any) => void

action: findAppropriateInternetAccount​

// type signature
findAppropriateInternetAccount: (location: UriLocation) => any