Configuring tracks
All tracks can contain:
trackId
- internal track ID, must be uniquename
- displayed track nameassemblyNames
- an array of assembly names a track is associated with, often just a single assemblyNamecategory
- (optional) array of categories to display in a hierarchical track selector
Example config.json
containing a track config for a BigBed file:
{
"assemblies": [
...the hg19 assembly...
],
"tracks": [
{
"type": "FeatureTrack",
"trackId": "repeats_hg19",
"name": "Repeats",
"assemblyNames": ["hg19"],
"category": ["Annotation"],
"adapter": {
"type": "BigBedAdapter",
"bigBedLocation": {
"uri": "https://jbrowse.org/genomes/hg19/repeats.bb",
}
}
}
]
}