v2.4.1 Release

Hello all, this release adds a number of small enhancements to the dotplot view including scroll zoom, and also fixes a number of small bugs. See the release notes below for details

Downloads

• v2.4.1

To install JBrowse 2 for the web, you can download the link above, or you can use the JBrowse CLI to automatically download the latest version. See the JBrowse web quick start for more details.

2.4.1 (2023-03-14)

🚀 Enhancement

• core
  • #3534 Improve visibility of SNPs on alignments track (@cmdcolin)
  • #3561 Add scroll zoom, d-pad, and more click+drag options to dotplot (@cmdcolin)
• Other
  • #3574 Add ability to load all built-in synteny data sources from @jbrowse/cli (@cmdcolin)
  • #3564 Use double-click to zoom in on particular offset in LGV, and make ctrl+scroll also zoom in on particular offset (@cmdcolin)

🐛 Bug Fix

• #3578 Fix selected synteny feature getting unselected after scroll (@cmdcolin)
• #3566 Fix use of "show all regions with data" feature in SV inspector with TRA entries (with CHR2 from INFO) (@cmdcolin)
• #3558 Fix visual effect from using the overview scalebar click and dragging backwards (@cmdcolin)
• #3556 Fix infinite loading state when no synteny features are visible in synteny view (@cmdcolin)
• #3551 Fix bad layout on tabix tracks that have Unicode characters (@cmdcolin)
• #3548 Fix upper case querying of jbrowse 1 text search store (@cmdcolin)
• #3545 Fix issue where clearing search box on LGV import form turns search box into loading bar (@cmdcolin)

📝 Documentation

• #3571 Fixing link to PAG 2023 tutorial (@scottcain)

🏠 Internal

• Other
  • #3567 Update github actions workflows to newer versions (@cmdcolin)
• __mocks__, core, text-indexing
  • #3557 Add additional lint rules from typescript-eslint and eslint-plugin-unicorn (@cmdcolin)

Committers: 2

• Colin Diesh (@cmdcolin)
• Scott Cain (@scottcain)