Here are some of the feature glyphs built into JBrowse. These are what you specify for the --cssclass option to gff-to-json.pl, or for the "class" value or "subfeatureClasses" map in the config file. You can also easily add your own; look in the genome.css file for examples.
Simple features:| class name | how it looks |
|---|---|
| feature | |
| feature2 | |
| feature3 | |
| feature4 | |
| feature5 | |
| exon | |
| cds | |
| dblhelix | |
| triangle hgred | |
| triangle hgblue |
| config | how it looks |
|---|---|
| class: transcript |