Category Archives: Software releases

JBrowse 1.7.0, now with data export, direct BAM display, and much more

I am pleased to announce the release of JBrowse 1.7.0, which includes a great many enhancements both large and small.  Very exciting! First, the download links: JBrowse-1.7.0.zip – 2.9M – Includes everything you need to display your data on the web … Continue reading

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JBrowse 1.6.5 bugfix release

I’m pleased to announce the release of JBrowse 1.6.5, containing some small new features, plus fixes for some issues in the 1.6.4 release. Files for download: JBrowse-1.6.5-min.zip – 2.8M JBrowse-1.6.5-full.zip – 27.3M Changes in this release: The location box now shows the … Continue reading

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JBrowse 1.6.4 bugfix release

JBrowse 1.6.4 has been released, containing fixes for some small issues in the 1.6.3 release. Files for download: JBrowse-1.6.4-min.zip – 2.8M JBrowse-1.6.4-full.zip – 27.3M Changes in this release: Improvements to the scalability of generate-names.pl. Many thanks to Steffi Geisen for her ongoing … Continue reading

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JBrowse 1.6.3 bugfix release

JBrowse 1.6.3 has been released, containing fixes for some small issues in the 1.6.2 release. Files for download: JBrowse-1.6.3-min.zip – 2.8M JBrowse-1.6.3-full.zip – 27.3M Changes in this release: Fixed bug with shift-rubberband-zooming not working on Windows (issue #150) (Erik Derohanian). Fixed “Can’t … Continue reading

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JBrowse 1.6.2 bugfix release

JBrowse 1.6.2 has been released, containing fixes for some small issues in the 1.6.1 release. Files for download: JBrowse-1.6.2-min.zip – 2.8M JBrowse-1.6.2-full.zip – 27.3M Changes in this release: Fixed feature-layout performance problem when zoomed very far in on features that are much … Continue reading

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JBrowse 1.6.1 bugfix release

JBrowse 1.6.1 has been released, containing fixes for some small issues in the 1.6.0 release. Files for download: JBrowse-1.6.1-min.zip – 2.8M JBrowse-1.6.1-full.zip – 27.3M Changes in this release: JBrowse now attempts to prevent feature labels being obscured by track labels by keeping … Continue reading

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JBrowse 1.6.0 released, includes feature descriptions and more!

I’m very pleased to announce the release of JBrowse 1.6.0! This release is not quite as major as the previous two releases, but there are still some nice things added. As usual, this release comes in two flavors: the “minimal” … Continue reading

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JBrowse 1.5.0 released, includes direct BigWig access!

I’m very pleased to announce the release of JBrowse 1.5.0! There are three headline features in this release. First, we’ve integrated a direct-access BigWig data backend, adapted from the Dalliance Genome Explorer that can read wiggle data directly from compressed … Continue reading

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JBrowse 1.4.2 released

JBrowse 1.4.2 has been released, containing some small fixes for issues in the 1.4.1 release. JBrowse-1.4.2-min.zip – 2.6M JBrowse-1.4.2-full.zip – 5.5M Changes in this release: Restore support for histScale, subfeatureScale, and labelScale in –clientConfig command-line options and track configuration JSON. Thanks to … Continue reading

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JBrowse 1.4.1 released

JBrowse 1.4.1 has been released, containing some small fixes for issues in the 1.4.0 release. JBrowse-1.4.1-min.zip – 2.6M JBrowse-1.4.1-full.zip – 5.5M Changes in this release: Made displayColumns option for the faceted track selector case-insensitive, and interpret a column name of “Name” as … Continue reading

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