Author Archives: Robert Buels

About Robert Buels

JBrowse Lead Developer

JBrowse 1.7.1 bugfix release

JBrowse 1.7.1 has been released, containing fixes for some issues in the 1.7.0 release. Files for download: JBrowse-1.7.1.zip – 2.9M JBrowse-1.7.1-dev.zip – 28.3M Changes in this release: Fixed bug in which bars below the origin of Wiggle/XYPlot were drawn incorrectly (issue #161). … Continue reading

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JBrowse 1.7.0, now with data export, direct BAM display, and much more

I am pleased to announce the release of JBrowse 1.7.0, which includes a great many enhancements both large and small.  Very exciting! First, the download links: JBrowse-1.7.0.zip – 2.9M – Includes everything you need to display your data on the web … Continue reading

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JBrowse 1.6.5 bugfix release

I’m pleased to announce the release of JBrowse 1.6.5, containing some small new features, plus fixes for some issues in the 1.6.4 release. Files for download: JBrowse-1.6.5-min.zip – 2.8M JBrowse-1.6.5-full.zip – 27.3M Changes in this release: The location box now shows the … Continue reading

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JBrowse 1.6.4 bugfix release

JBrowse 1.6.4 has been released, containing fixes for some small issues in the 1.6.3 release. Files for download: JBrowse-1.6.4-min.zip – 2.8M JBrowse-1.6.4-full.zip – 27.3M Changes in this release: Improvements to the scalability of generate-names.pl. Many thanks to Steffi Geisen for her ongoing … Continue reading

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JBrowse 1.6.3 bugfix release

JBrowse 1.6.3 has been released, containing fixes for some small issues in the 1.6.2 release. Files for download: JBrowse-1.6.3-min.zip – 2.8M JBrowse-1.6.3-full.zip – 27.3M Changes in this release: Fixed bug with shift-rubberband-zooming not working on Windows (issue #150) (Erik Derohanian). Fixed “Can’t … Continue reading

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JBrowse 1.6.2 bugfix release

JBrowse 1.6.2 has been released, containing fixes for some small issues in the 1.6.1 release. Files for download: JBrowse-1.6.2-min.zip – 2.8M JBrowse-1.6.2-full.zip – 27.3M Changes in this release: Fixed feature-layout performance problem when zoomed very far in on features that are much … Continue reading

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@rbuels and JBrowse at the Semantic Web BioHackathon 2012

I had the great honor of being invited to the BioHackathon 2012, held this past week in Toyama, Japan and funded by Japan’s National Bioscience Database Center (NBDC) and Database Center for Life Science (DBCLS).  It’s been an exhausting week … Continue reading

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JBrowse 1.6.1 bugfix release

JBrowse 1.6.1 has been released, containing fixes for some small issues in the 1.6.0 release. Files for download: JBrowse-1.6.1-min.zip – 2.8M JBrowse-1.6.1-full.zip – 27.3M Changes in this release: JBrowse now attempts to prevent feature labels being obscured by track labels by keeping … Continue reading

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JBrowse 1.6.0 released, includes feature descriptions and more!

I’m very pleased to announce the release of JBrowse 1.6.0! This release is not quite as major as the previous two releases, but there are still some nice things added. As usual, this release comes in two flavors: the “minimal” … Continue reading

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JBrowse 1.5.0 released, includes direct BigWig access!

I’m very pleased to announce the release of JBrowse 1.5.0! There are three headline features in this release. First, we’ve integrated a direct-access BigWig data backend, adapted from the Dalliance Genome Explorer that can read wiggle data directly from compressed … Continue reading

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