Author Archives: Robert Buels

About Robert Buels

JBrowse Lead Developer

JBrowse 1.10.2 maintenance release

JBrowse 1.10.2 has been released, with fixes for some minor issues, and some minor improvements to the CanvasFeatures track. Files for download: JBrowse-1.10.2.zip – 5.2M file SHA1 4e00586e070d8797a3598b405d3502906993c4e5 JBrowse-1.10.2-dev.zip – 26M file SHA1 8865724542fcbdec5de974273b27e0a10680156b Changes in this release: Added mouse-over ‘tooltips’ to … Continue reading

Posted in Software releases | Leave a comment

JBrowse 1.10.1 maintenance release

JBrowse 1.10.1 has been released, with fixes for some minor issues and one major issue. Files for download: JBrowse-1.10.1.zip – 5.2M file SHA1 3677d10ba4ffd6ba604871dc11b1989131baff9f JBrowse-1.10.1-dev.zip – 26M file SHA1 f6a1a89d42498887ee0123ce2b98afea4478b6e0 Changes in this release: Added support in maker2jbrowse for user-defined source tags … Continue reading

Posted in Software releases | Leave a comment

JBrowse 1.10.0: Combination tracks, better feature tracks, more glyphs, SPARQL support, and track pinning!

After a long, hard development push, JBrowse 1.10.0 is out today!  There are several major improvements in this release, and a huge number of smaller improvements and bugfixes. Download links JBrowse-1.10.0.zip – 5.2M – Includes everything you need to display your … Continue reading

Posted in Software releases | Leave a comment

JBrowse 1.9.8 maintenance release

JBrowse 1.9.8 has been released, with fixes for some minor issues, a performance improvement when many HTML-based tracks are open, and a new yScalePosition configuration option for all tracks can can be set to “left”, “right”, or “center” to change … Continue reading

Posted in Software releases | Leave a comment

About JBrowse version numbers

Just so everybody’s on the same page, I thought I should point out that from 1.2.0 onward, JBrowse version numbers follow a predictable scheme that encodes a bit of information about what is contained in a release. JBrowse version numbers … Continue reading

Posted in Development | Leave a comment

JBrowse 1.9.7 maintenance release

JBrowse 1.9.7 has been released, with an important fix for a race condition that intermittently causes some NCList-based tracks to show the wrong genomic region when the browser is first started, and a fix for a bug in how JBrowse … Continue reading

Posted in Software releases | Leave a comment

JBrowse 1.9.6 maintenance release

JBrowse 1.9.6 has been released, with a few more bug fixes and a new –workdir option for generate-names.pl. Files for download: JBrowse-1.9.6.zip – 5.1M file SHA1 2d09a47a57c314ed728ae49db9998a6780ad6609 JBrowse-1.9.6-dev.zip – 26M file SHA1 115abb36a78df4307c87d02b5093f88eb8f43f28 Changes in this release: Fixed a bug in which … Continue reading

Posted in Software releases | Leave a comment

JBrowse 1.9.5 maintenance release

JBrowse 1.9.5 has been released, with some small new features, and fixes for many small issues. Files for download: JBrowse-1.9.5.zip – 5.1M file SHA1 4972e99e345e0a31261dc0d14a15eb6a114aae7f JBrowse-1.9.5-dev.zip – 26M file SHA1 a388bb29210fea0deade3d8ea80985323f37c398 Changes in this release: Added a trackSelector.initialSortColumn configuration variable to the … Continue reading

Posted in Software releases | Leave a comment

JBrowse 1.9.4 maintenance release

JBrowse 1.9.4 has been released, with fixes for a number of smaller issues present in the 1.9.3 release. Files for download: JBrowse-1.9.4.zip – 5.0M file SHA1 35d5b1a7b0d6ac5eec90d3d786ea62158cceca67 JBrowse-1.9.4-dev.zip – 26M file SHA1 56a6ab1585794987017b70069aa4ff32b2ed28ca Changes in this release: Fixed a bug with configuration … Continue reading

Posted in Software releases | Leave a comment

JBrowse 1.9.3 maintenance release

JBrowse 1.9.3 has been released, with fixes for a number of smaller issues present in the 1.9.2 release. Files for download: JBrowse-1.9.3.zip – 5.0M file SHA1 b7a0d23430b1c6d0504322136bcc2f5b0329bc9d JBrowse-1.9.3-dev.zip – 28.6M file SHA1 a928cbb654e2cfefb87535c05f281965d5f3f5d4 Changes in this release: Fixed a bug in VCF … Continue reading

Posted in Software releases | Leave a comment